Example gallery¶

These example scripts demonstrate the functionality offered by PySurfer, from the most basic tasks to more complex visualizations.

If you have used PySurfer to present neuroimaging data in a way that isn’t covered here, please contribute it!

../_images/sphx_glr_plot_basics_thumb.png

Basic Visualization¶

../_images/sphx_glr_plot_custom_colors_thumb.png

Plot RGBA values on brain surface¶

../_images/sphx_glr_plot_fmri_activation_thumb.png

Display fMRI Activation¶

../_images/sphx_glr_plot_fmri_activation_volume_thumb.png

Display an fMRI Volume¶

../_images/sphx_glr_plot_fmri_conjunction_thumb.png

Display a Conjunction Map¶

../_images/sphx_glr_plot_foci_thumb.png

Plot Activation Foci¶

../_images/sphx_glr_plot_freesurfer_normalization_thumb.png

Plot Freesurfer Normalization¶

../_images/sphx_glr_plot_label_thumb.png

Display ROI Labels¶

../_images/sphx_glr_plot_label_foci_thumb.png

Generate Surface Labels¶

../_images/sphx_glr_plot_meg_inverse_solution_thumb.png

Plot MEG inverse solution¶

../_images/sphx_glr_plot_morphometry_thumb.png

Overlay Morphometry Data¶

../_images/sphx_glr_plot_parc_values_thumb.png

Display ROI Values¶

../_images/sphx_glr_plot_parcellation_thumb.png

Using Annotation Files¶

../_images/sphx_glr_plot_probabilistic_label_thumb.png

Display Probabilistic Labels¶

../_images/sphx_glr_plot_resting_correlations_thumb.png

Display Resting-State Correlations¶

../_images/sphx_glr_plot_topographic_contours_thumb.png

Display Activation Contours¶

../_images/sphx_glr_plot_transparent_brain_thumb.png

Plot Transparent Brain¶

../_images/sphx_glr_plot_vector_meg_inverse_solution_thumb.png

Plot vector-valued MEG inverse solution¶

../_images/sphx_glr_rotate_animation_thumb.png

Animate brain and save movie¶

../_images/sphx_glr_save_movie_thumb.png

Create movie from MEG inverse solution¶

../_images/sphx_glr_save_views_thumb.png

Save a set of views¶

../_images/sphx_glr_show_views_thumb.png

Show the different brain views¶

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PySurfer Example Data¶

This directory contains a few lightweight files that support the automatic examples for PySurfer.

Gallery generated by Sphinx-Gallery